PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_11319-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family BES1
Protein Properties Length: 544aa    MW: 56825.5 Da    PI: 10.7942
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_11319-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822202.41.4e-622033502147
           DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasaspessl 94 
                      g++r ptw+ErEnn+rRERrRRaiaakiy+GLRa+Gny+lpk++DnneVlkALc+eAGwvve+DGttyr+g+kp+ ++     +sasasp+ss+
  TRIUR3_11319-P1 203 GGTRVPTWRERENNRRRERRRRAIAAKIYTGLRAYGNYNLPKHCDNNEVLKALCNEAGWVVEPDGTTYRRGCKPPpQARPDPMRSASASPCSSY 296
                      789************************************************************************888888999********** PP

           DUF822  95 qsslkssalaspvesysaspksssfpspssldsislasa.........asllpvlsvlslvs 147
                      q        +sp++sy++sp+sssfps+ s+++i+l            +sl+p+l++ls+ +
  TRIUR3_11319-P1 297 Q--------PSPRASYNPSPASSSFPSSGSSSHITLGGGnnfiggvegSSLIPWLKNLSSNP 350
                      *........*************************9987678999999999999999998744 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.3E-67203347IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 544 aa     Download sequence    Send to blast
MVAAAKRETI NSNSLIQRRR VLPAGAPMMH GPAGGSGGGG GHGLGGTRVP TWRERENNRR  60
RERRRRRARA GRHEGAHVEG AGEQPAEGAA AAAGTGWAAR GCPRGGSGRT TGGGSGGGGG  120
HGLGGTRVPT WRERENNRRR ERRRRRARAG RHEGAHVEGA GEQPAEGAAA AAGTGWAARG  180
CPRGGSGRTT GGGSGGGGGH GLGGTRVPTW RERENNRRRE RRRRAIAAKI YTGLRAYGNY  240
NLPKHCDNNE VLKALCNEAG WVVEPDGTTY RRGCKPPPQA RPDPMRSASA SPCSSYQPSP  300
RASYNPSPAS SSFPSSGSSS HITLGGGNNF IGGVEGSSLI PWLKNLSSNP SFASSSKLPQ  360
LHHLYFNGGS ISAPVTPPSS SPTHTPRMKT DWESQCVLPP WAGANYTSLP NSTPPSPGHH  420
VAPDPAWLAG FQISSAGPSS PTYNLVSHNP FGIALASSSR ACTPGQSGTC SPVMGDHAPA  480
HHDVQMEMAD GAPDDFAFGS NSNGNNGSPG LVKAWEGERI HEECASDELE LTLGSSRTRG  540
EQPF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1137147RRRERRRRRAR
2138145RRERRRRR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3601810.0AK360181.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1112F17.
GenBankAK3667940.0AK366794.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2046O02.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003563774.10.0PREDICTED: protein BZR1 homolog 3
SwissprotQ5Z9E51e-179BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBLM8APZ10.0M8APZ1_TRIUA; Uncharacterized protein
STRINGMLOC_6679.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136638112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.12e-66BES1/BZR1 homolog 4